Index A | B | C | D | E | F | G | H | K | L | M | N | O | P | R | S | T | U | V | W | X | Z A aggregate() (in module rapids_singlecell.get) anndata_to_CPU() (in module rapids_singlecell.get) anndata_to_GPU() (in module rapids_singlecell.get) assign_by_threshold() (rapids_singlecell.ptg.GuideAssignment method) assign_mixture_model() (rapids_singlecell.ptg.GuideAssignment method) assign_to_max_guide() (rapids_singlecell.ptg.GuideAssignment method) aucell (in module rapids_singlecell.dcg) B bbknn() (in module rapids_singlecell.pp) bootstrap() (rapids_singlecell.ptg.Distance method) C calculate_niche() (in module rapids_singlecell.gr) calculate_qc_metrics() (in module rapids_singlecell.pp) co_occurrence() (in module rapids_singlecell.gr) contrast_distances() (rapids_singlecell.ptg.Distance method) create_contrasts() (rapids_singlecell.ptg.Distance static method) D diffmap() (in module rapids_singlecell.tl) Distance (class in rapids_singlecell.ptg) draw_graph() (in module rapids_singlecell.tl) E embedding_density() (in module rapids_singlecell.tl) F filter_cells() (in module rapids_singlecell.pp) filter_genes() (in module rapids_singlecell.pp) filter_highly_variable() (in module rapids_singlecell.pp) flag_gene_family() (in module rapids_singlecell.pp) G GuideAssignment (class in rapids_singlecell.ptg) H harmony_integrate() (in module rapids_singlecell.pp) highly_variable_genes() (in module rapids_singlecell.pp) K kmeans() (in module rapids_singlecell.tl) L lda() (rapids_singlecell.ptg.Mixscape method) leiden() (in module rapids_singlecell.tl) ligrec() (in module rapids_singlecell.gr) log1p() (in module rapids_singlecell.pp) louvain() (in module rapids_singlecell.tl) M mixscale() (rapids_singlecell.ptg.Mixscape method) Mixscape (class in rapids_singlecell.ptg) mixscape() (rapids_singlecell.ptg.Mixscape method) mlm (in module rapids_singlecell.dcg) module rapids_singlecell.dcg rapids_singlecell.get rapids_singlecell.gr rapids_singlecell.pp rapids_singlecell.ptg rapids_singlecell.tl N neighbors() (in module rapids_singlecell.pp) normalize_pearson_residuals() (in module rapids_singlecell.pp) normalize_total() (in module rapids_singlecell.pp) O onesided_distances() (rapids_singlecell.ptg.Distance method) P pairwise() (rapids_singlecell.ptg.Distance method) pca() (in module rapids_singlecell.pp) perturbation_signature() (rapids_singlecell.ptg.Mixscape method) R rank_genes_groups() (in module rapids_singlecell.tl) rapids_singlecell.dcg module rapids_singlecell.get module rapids_singlecell.gr module rapids_singlecell.pp module rapids_singlecell.ptg module rapids_singlecell.tl module regress_out() (in module rapids_singlecell.pp) S scale() (in module rapids_singlecell.pp) score_genes() (in module rapids_singlecell.tl) score_genes_cell_cycle() (in module rapids_singlecell.tl) scrublet() (in module rapids_singlecell.pp) scrublet_simulate_doublets() (in module rapids_singlecell.pp) spatial_autocorr() (in module rapids_singlecell.gr) T tsne() (in module rapids_singlecell.tl) U ulm (in module rapids_singlecell.dcg) umap() (in module rapids_singlecell.tl) V validate_contrasts() (rapids_singlecell.ptg.Distance static method) W waggr (in module rapids_singlecell.dcg) X X_to_CPU() (in module rapids_singlecell.get) X_to_GPU() (in module rapids_singlecell.get) Z zscore (in module rapids_singlecell.dcg)
